pathogen

2026-07-01 16:41:06 +07:00
parent e3f2e51232
commit 907b3b2aec
9 changed files with 561 additions and 69 deletions
--- a/app/Http/Controllers/PathogenController.php
+++ b/app/Http/Controllers/PathogenController.php
@@ -0,0 +1,143 @@
+<?php
+
+namespace App\Http\Controllers;
+use App\Enums\RecordStatusEnum;
+use App\Http\Controllers\Helper\GlobalController;
+use App\Models\BaseModel;
+use App\Models\Concept;
+use App\Models\Pathogen;
+use Illuminate\Http\Request;
+use Illuminate\Support\Facades\Auth;
+
+use Illuminate\Support\Facades\Session;
+
+
+class PathogenController extends Controller
+{
+    protected $model;
+    protected $baseOrganizationId;
+    protected $conceptModel;
+
+    public function __construct(){
+        $this->baseOrganizationId = Session::get('base_organization_id');
+        $this->base = Session::get('base_organization');
+        $this->model = new Pathogen();
+        $this->conceptModel = new Concept();
+    }
+
+    public function index(Request $request){
+        $recordStatusCondition = Auth::id()==1 ? [RecordStatusEnum::DELETE, RecordStatusEnum::ACTIVE] : [RecordStatusEnum::ACTIVE];
+        $concepts = $this->conceptModel::query()->where(BaseModel::RECORD_STATUS_FIELD, RecordStatusEnum::ACTIVE)->get();
+        $pathogens = $this->model::with(['riskGroup', 'bsl', 'pathogenType'])->whereIn(BaseModel::RECORD_STATUS_FIELD, $recordStatusCondition)
+            ->when(!empty($request->kword), function ($query) use($request){
+                $query->whereRaw("replace(scientific_name, ' ','') like '%".str_replace(" ","",$request->kword)."%'")
+                    ->orWhereRaw("replace(common_name, ' ','') like '%".str_replace(" ","",$request->kword)."%'")
+                    ->orWhereRaw("replace(strain, ' ','') like '%".str_replace(" ","",$request->kword)."%'");
+            })->orderBy(BaseModel::CREATED_AT,'desc')->paginate(config('nrml.pagination.perpage', 10));
+        return view('pathogen', ['pathogens' => $pathogens, 'concepts' => $concepts]);
+    }
+
+    public function save(Request $request){
+        try {
+
+            $validator = \Validator::make($request->all(), [
+                'pathogen_category_concept_id' => 'required',
+                'scientific_name' => 'required',
+                'common_name' => 'required',
+                'risk_group_concept_id' => 'required',
+                'biosafety_level_concept_id' => 'required',
+            ]);
+            if ($validator->fails()) {
+                return response()->json(['success' => false, 'message' => __('building.create_fail'), 'errors' => $validator->errors()->all()]);
+            }
+            $data = array(
+                'pathogen_category_concept_id' => $request->pathogen_category_concept_id,
+                'scientific_name' => $request->scientific_name,
+                'common_name' => $request->common_name,
+                'risk_group_concept_id' => $request->risk_group_concept_id,
+                'biosafety_level_concept_id' => $request->biosafety_level_concept_id,
+                'infectious_dose' => $request->infectious_dose,
+                'transmission_mode' => $request->transmission_mode,
+                'storage_requirement' => $request->storage_requirement,
+                'min_temp' => $request->min_temp,
+                'max_temp' => $request->max_temp,
+                'created_at' => date('Y-m-d H:i:s'),
+                'created_by' => Auth::id()
+            );
+            $this->model::query()->insert($data);
+            return response()->json(['success' => true, 'message' => __('laboratory.create_success')]);
+        }
+        catch (\Exception $e){
+            return response()->json(['success' => false, 'message' => __('laboratory.create_fail'), 'errors' => $e->getMessage()]);
+        }
+    }
+
+
+    public function update(Request $request){
+        try {
+            $validator = \Validator::make($request->all(), [
+                'pathogen_category_concept_id' => 'required',
+                'scientific_name' => 'required',
+                'common_name' => 'required',
+                'risk_group_concept_id' => 'required',
+                'biosafety_level_concept_id' => 'required',
+            ]);
+            if ($validator->fails()) return response()->json(['errors' => $validator->errors()->all()]);
+            $data = array(
+                'pathogen_category_concept_id' => $request->pathogen_category_concept_id,
+                'scientific_name' => $request->scientific_name,
+                'common_name' => $request->common_name,
+                'risk_group_concept_id' => $request->risk_group_concept_id,
+                'biosafety_level_concept_id' => $request->biosafety_level_concept_id,
+                'infectious_dose' => $request->infectious_dose,
+                'transmission_mode' => $request->transmission_mode,
+                'storage_requirement' => $request->storage_requirement,
+                'min_temp' => $request->min_temp,
+                'max_temp' => $request->max_temp,
+                'updated_at' => date('Y-m-d H:i:s'),
+                'updated_by' => Auth::id()
+            );
+            $this->model::query()->where('id', $request->pathogen_id)->update($data);
+            return response()->json(['success' => true, 'message' => __('laboratory.update_success')]);
+        } catch (\Exception $e){
+            return response()->json(['success' => false, 'message' => __('laboratory.update_fail'), 'errors' => $e->getMessage()]);
+        }
+    }
+
+    public function get(Request $request){
+        try{
+            $lab = $this->model::query()->where('id', $request->pathogen_id)->get()->first();
+            return response()->json(['success' => true, 'message' => __('laboratory.get_success'), 'data' => $lab]);
+        } catch (\Exception $e){
+            return response()->json(['success' => false, 'message' => __('laboratory.get_fail'), 'errors' => $e->getMessage()]);
+        }
+
+    }
+
+    public function delete(Request $request){
+        try{
+            $this->model::query()->where('id', $request->pathogen_id)->update(array(
+                BaseModel::DELETED_AT_FIELD => date('Y-m-d H:i:s'),
+                BaseModel::DELETED_BY_FIELD => Auth::id(),
+                BaseModel::RECORD_STATUS_FIELD => RecordStatusEnum::DELETE
+            ));
+            return response()->json(['success' => true, 'message' => __('laboratory.delete_success')]);
+        }
+        catch (\Exception $e){
+            return response()->json(['success' => false, 'message' => __('laboratory.delete_fail'), 'errors' => $e->getMessage()]);
+        }
+
+    }
+
+    public function restore(Request $request){
+        try{
+            $this->model::query()->where('id', $request->pathogen_id)->update(array(BaseModel::RECORD_STATUS_FIELD=> RecordStatusEnum::ACTIVE));
+            return response()->json(['success' => true, 'message' => __('laboratory.restore_success')]);
+        }
+        catch (\Exception $e){
+            return response()->json(['success' => false, 'message' => __('laboratory.restore_fail'), 'errors' => $e->getMessage()]);
+        }
+    }
+
+
+}
--- a/app/Models/Organism.php
+++ b/app/Models/Organism.php
@@ -1,27 +0,0 @@
-<?php
-
-namespace App\Models;
-use App\Enums\RecordStatusEnum;
-use Illuminate\Database\Eloquent\Factories\HasFactory;
-
-class Organism extends BaseModel
-{
-    public $timestamps = false;
-    use HasFactory;
-    /**
-     * The table associated with the model.
-     *
-     * @var string
-     */
-    protected $fillable = ['name_en', 'weight', 'is_bold', 'organization_id'];
-
-    public static function boot()
-    {
-        parent::boot();
-    }
-
-    public function lab(){
-        return $this->belongsTo('App\Models\Organization', 'organization_id','id');
-    }
-
-}
--- a/app/Models/Pathogen.php
+++ b/app/Models/Pathogen.php
@@ -0,0 +1,51 @@
+<?php
+
+namespace App\Models;
+use App\Enums\RecordStatusEnum;
+use App\Models\Traits\HasLocalizedName;
+use Illuminate\Database\Eloquent\Factories\HasFactory;
+use Illuminate\Support\Facades\Session;
+use App\Traits\AuditLogTrait;
+
+class Pathogen extends BaseModel
+{
+    public $timestamps = false;
+    use HasFactory;
+    use HasLocalizedName;
+    use AuditLogTrait;
+    /**
+     * The table associated with the model.
+     *
+     * @var string
+     */
+
+    protected $appends = ['name'];
+
+    protected $primaryKey = 'id';
+
+    protected $fillable = [
+        'pathogen_category_concept_id','scientific_name', 'common_name', 'risk_group_concept_id',
+        'biosafety_level_concept_id', 'infectious_dose', 'transmission_mode', 'storage_requirement', 'min_temp', 'max_temp',
+        BaseModel::CREATED_BY_FIELD, BaseModel::UPDATED_AT_FIELD, BaseModel::UPDATED_BY_FIELD,
+        BaseModel::DELETED_AT_FIELD, BaseModel::DELETED_BY_FIELD, BaseModel::RECORD_STATUS_FIELD
+    ];
+
+    public static function boot()
+    {
+        parent::boot();
+    }
+
+    public function pathogenType(){
+        return $this->belongsTo(Concept::class, 'pathogen_category_concept_id', 'id');
+    }
+
+    public function riskGroup(){
+        return $this->belongsTo(Concept::class, 'risk_group_concept_id', 'id');
+    }
+
+    public function bsl(){
+        return $this->belongsTo(Concept::class, 'biosafety_level_concept_id', 'id');
+    }
+
+
+}
--- a/app/Models/SampleType.php
+++ b/app/Models/SampleType.php
@@ -1,38 +0,0 @@
-<?php
-
-namespace App\Models;
-use App\Enums\RecordStatusEnum;
-use Illuminate\Database\Eloquent\Factories\HasFactory;
-use Illuminate\Support\Facades\Session;
-
-class SampleType extends BaseModel
-{
-    public $timestamps = false;
-    use HasFactory;
-    /**
-     * The table associated with the model.
-     *
-     * @var string
-     */
-
-    protected $table='sample_types';
-
-    protected $fillable = ['name_en', 'weight', 'department_id','tube','description','organization_id','bg_color','color', 'enter_form_id', 'preview_form_id'];
-
-    public static function boot()
-    {
-        parent::boot();
-    }
-
-    public function department(){
-        return $this->belongsTo(Department::class, 'department_id');
-    }
-
-    public function testSamples(){
-        return $this->hasMany(TestSample::class, 'sample_type_id')
-            ->where([BaseModel::RECORD_STATUS_FIELD => RecordStatusEnum::ACTIVE])
-            //->where('organization_id', Session::get('base_organization_id'))
-            ->orderBy('weight');
-    }
-
-}